Package jebl.evolution.align.scores
Class JukesCantor
- java.lang.Object
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- jebl.evolution.align.scores.Scores
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- jebl.evolution.align.scores.NucleotideScores
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- jebl.evolution.align.scores.JukesCantor
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- All Implemented Interfaces:
ScoreMatrix
public class JukesCantor extends NucleotideScores
Jukes Cantor assumes equal substitution frequencies and equal nucleotide equilibrium frequencies.- Version:
- $Id: JukesCantor.java 319 2006-05-04 00:16:20Z matt_kearse $
- Author:
- Richard Moir
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Field Summary
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Fields inherited from class jebl.evolution.align.scores.NucleotideScores
CLUSTALW, IUB
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Constructor Summary
Constructors Constructor Description JukesCantor(float d)
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Method Summary
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Methods inherited from class jebl.evolution.align.scores.NucleotideScores
getAlphabet, getName, toString
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Methods inherited from class jebl.evolution.align.scores.Scores
duplicate, forMatrix, getMatrixString, getScore, includeAdditionalCharacters, includeGaps
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