Package jebl.evolution.align.scores
Class SubstScoreMatrix
- java.lang.Object
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- jebl.evolution.align.scores.Scores
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- jebl.evolution.align.scores.SubstScoreMatrix
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- All Implemented Interfaces:
ScoreMatrix
public class SubstScoreMatrix extends Scores
- Version:
- $Id: SubstScoreMatrix.java 360 2006-06-22 07:42:48Z pepster $
- Author:
- Alexei Drummond
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Constructor Summary
Constructors Constructor Description SubstScoreMatrix(RateMatrix rateMatrix)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description java.lang.String
getAlphabet()
java.lang.String
getName()
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Methods inherited from class jebl.evolution.align.scores.Scores
duplicate, forMatrix, getMatrixString, getScore, includeAdditionalCharacters, includeGaps, toString
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Constructor Detail
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SubstScoreMatrix
public SubstScoreMatrix(RateMatrix rateMatrix)
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