Interface ScoreMatrix

    • Method Detail

      • getName

        java.lang.String getName()
        Returns:
        human readable name
      • getScore

        float getScore​(char x,
                       char y)
        Returns:
        the score for matching char x with char y
      • getAlphabet

        java.lang.String getAlphabet()
        Returns:
        a string containing the valid characters for this score matrix.